Journal Publications:

• Bayesian phylogenetics with BEAUti and the BEAST 1.7
  Alexei J. Drummond, Marc A. Suchard, Dong Xie, and Andrew Rambaut, Molecular Biology and Evolution, doi: 10.1093/molbev/mss075, first published online on February 25, 2012.
  


• Estimating the basic reproductive number from viral sequence data
  Tanja Stadler, ..., Dong Xie (10th), ..., Molecular Biology and Evolution, doi: 10.1093/molbev/msr217, first published online on September 2, 2011.
  


• Object-Oriented Knowledge Framework For Modelling Human Mastication
  D. Xie, W.L. Xu, K.D. Foster, J. Bronlund, Expert Systems with Applications,Volume 36, Issue 3, Part 1, Pages 4810-4821, April 2009.
  


• Fuzzy Prototype Model and Semantic Distance
  Dong (Walter) Xie and J. F. Baldwin, Information Systems, Volume 32, Issue 7, Pages 944-967, November 2007.
  Abstract
  


• Intelligent SQL/Fril Interrogator
  Dong (Walter) Xie and J. F. Baldwin, International Journal of Intelligent Systems, Volume 22, Issue 3, Pages 279-302, March 2007.
  Abstract
  

Conference Publications and Posters:

• Bayesian time-tree priors
  Alexei Drummond, Joseph Heled, Denise Kuehnert, Walter Xie, and Tanja Stadler, Phylogenetics: New data, new Phylogenetic challenges Follow-up Meeting, Isaac Newton Institute for Mathematical Sciences, Cambridge, UK, 20 - 24 June 2011.
  PDF
  
  
• The Prototype Model - Modelling Properties Of Clusters
  D. Xie and W. L. Xu, The 4th International Conference on Computational Intelligence, Robotics and Autonomous Systems, Page 190-195, Palmerston North, New Zealand, November, 2007.
  
  
• Chewing Knowledge - Representation and Discovery
  D. Xie, K. D. Foster, W. L. Xu, J. Bronlund, Biomouth Symposium, Auckland, December 13-14, 2006
  PDF
  
  
• Fuzzy Association Rules discovered on Effective Reduced Database Algorithm
  Dong (Walter) Xie, FUZZ-IEEE 2005 (The 14th IEEE International Conference on Fuzzy Systems), ISBN: 0-7803-9159-4, Page 779-784, Reno, USA, May, 2005
  
  
• Simple Fuzzy Logic Rules based on Fuzzy Decision Tree for Classification and Prediction Problem
  J. F. Baldwin and Dong (Walter) Xie, The International Conference on Intelligent Information Processing (IIP 2004), Edited by Zhongzhi Shi and Qing He, Published by Springer, ISBN 0-387-23151-X (HC), Page 175-184, Beijing, October, 2004
  
  
  

Book Chapters:

• Fuzzy Logic Data Mining Based on Mass Assignment Theory
  Dong (Walter) Xie and J. F. Baldwin, Fuzzy Logic: Theory, Programming and Applications, (Editor: Raymond E. Vargas), Published by Nova Science Publishers Inc, ISBN: 978-1-60456-915-5, Page 405-432, 2009.
  
  
• Knowledge Discovery And Knowledge Framework For Human Mastication Of Foods
  D. Xie, W.L. Xu, K.D. Foster, J. Bronlund, and H.Y. Yao, Handbook of Research on Artificial Intelligence in Industrial Information Systems, (Editor: Xuan F. Zha), in press, 2009.
  
  
  

Software & Systems:

• Intelligent SQL/Fril Interrogator (Fuzzy Logic Machine Learning Toolkit included)
  Artigence Ltd.
  Download: Abstract, Software Demo, PowerPoint, User Manual, Database (Access format), Database (MySQL format)
  The database is built by Data Generator designed by Dong Xie, which simulates the favourite and behaviour of a certain customer or a certain group of customers.
  Note: To run the software package, you have to register the database either in Access format or MySQL. For using MySQL database, you need install MySQL Connector/J and MySQL Connector/ODBC (used to copy mysql-connector-java-3.0.15-ga-bin.jar file to $JAVA_HOME/jre/lib/ext).